Puedes utilizar el siguiente código:
<!-- TWO STEPS TO INSTALL CENTERED POPUP:
  1.  Copy the coding into the HEAD of your HTML document
  2.  Add the last code into the BODY of your HTML document  -->
<!-- STEP ONE: Paste this code into the HEAD of your HTML document  -->
<HEAD>
<SCRIPT LANGUAGE="JavaScript">
<!-- Original:  Eric King (
[email protected]) -->
<!-- Web Site:  
http://redrival.com/eak/ -->
<!-- This script and many more are available free online at -->
<!-- The JavaScript Source!! 
http://javascript.internet.com -->
<!-- Begin
function NewWindow(mypage, myname, w, h, scroll) {
var winl = (screen.width - w) / 2;
var wint = (screen.height - h) / 2;
winprops = 'height='+h+',width='+w+',top='+wint+',left='+winl+',scrollbars='+scroll+',resizable'
win = window.open(mypage, myname, winprops)
if (parseInt(navigator.appVersion) >= 4) { win.window.focus(); }
}
//  End -->
</script>
</HEAD>
<!-- STEP TWO: Copy this code into the BODY of your HTML document  -->
<BODY>
<!-- Put the URL inside the link's href="..." section, then carefully -->
<!-- change 'name' to a name for your popup window.  The last three -->
<!-- items represent the popup window width, height, and scrollbars. -->
<a href="
http://www.yahoo.com/" onclick="NewWindow(this.href,'name','400','400','yes');return false;">Popup Yahoo.com</a>
<p><center>
<font face="arial, helvetica" size="-2">Free JavaScripts provided<br>
by <a href="
http://javascriptsource.com">The JavaScript Source</a></font>
</center><p>
<!-- Script Size:  1.12 KB -->